CDS
| Accession Number | TCMCG066C36408 |
| gbkey | CDS |
| Protein Id | XP_034571137.1 |
| Location | join(39416267..39416402,39416499..39416776,39416873..39416946,39417021..39417115,39418893..39418990,39419168..39419251,39419370..39419450,39419543..39419647,39419717..39419812,39420214..39420293,39420402..39420490,39420576..39420916) |
| Gene | LOC117835915 |
| GeneID | 117835915 |
| Organism | Setaria viridis |
Protein
| Length | 518aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034715246.1 |
| Definition | probable S-adenosyl-L-methionine-dependent RNA methyltransferase RSM22, mitochondrial [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | J |
| Description | Mitochondrial small ribosomal subunit Rsm22 |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction |
R00251
[VIEW IN KEGG] |
| KEGG_rclass |
RC00553
[VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K01469
[VIEW IN KEGG] |
| EC |
3.5.2.9
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00480
[VIEW IN KEGG] map00480 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005654 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCGGCCGCGCTCGTGCCGGAGACGGCGCAGCGGCTGCTGACGCCGGAGACCCTTCGCACGGCGGCCAAGCAGTCCCAGGGAATCCACCTCGTCCCCCTCTCCCTCCGCCGCGCCATCAAGCGCTACCTCCGCGACCAAGACAAGGCGCACATGAACCGCAAGGTGCTTCTGCTCTCGGCATCCTTCGACCGCGCCAAGGGAACCGGCGCCGAGCTCGCCGCGGCTGCCACCCGCGGCGCGCTCCTCGACGACCCAAACGCGCCCTCGGGCGCCGAGCAGCGGGCGGCGCGCTGGAAGGTGAGGTCCGCGTACGGCGATATCGGCCTCCGGTACCGCGAGGACGAGACAGTCGCCTACGTCGCGTCACGCATGCCCGCCATCTACGCCGCATGCCACCGCGTACTGCGCGAGGTTCGACGGAGGTTGCCAGAGTTTGCGCCTGCCAAGGTGTTGGATTTTGGTGCCGGGCCAAGCTCAGCGCTTTGGGCAATGAGGGCAGTGTGGCCAAAATCAATAGAGCGGGTTAACCTGGTCGAGCCTTCCAAGGAAATGCAGAGAGCAGGGCAGAGTCTACTTGACAATTTGAAGGGGTTGCCACTCATCCACAGCTATGATAGCATCCAAGAGTTGAACCGCAACATAGAAAAACATGAGCGAGGGCATGATCTTGTAATATCGTCTTACGCACTTGGAGAGATTCCTTCTTTGAGCGACCGAATAACAATAGTGCGCCAGCTTTGGGACCTCACAAGTGATGTATTGGTTTTGTTAGAGCCTGGAACACCCCAAGGAGCAAAGATTATAAGTCAAATGCGCTCTTATATCCTTTGGATGGAAAAGAGAAAGTGTCGCAAATCTGAGAAATCCTCAAGCCGTCCTCCAAGTAATGTGAAGAGCATCGTTGCTCACGAAGCCTCATTGAAAAATGGGTCTTTTGTGGTTGCCCCTTGTCCCCATGACGGTCAATGTCCATTGGAGAATTCAGACAAATACTGCCACTTTGTCCAGAGATTAGAGAGGACTTCATCTCAGCGTGCCTACAAGAGGTCAAAAGGTGTGCCTTTACGTGGTTTTGAGGATGAAAAATTTTGCTATGTTGCTTTAAGAAGGGGCAAACGACCAGAGGAAGCTTGGCCACTTGATGGCATGAAATTTGAGACGCTCAAAGAACGCCATGCTAAGAGAAAACCAGAAGATCTTAGCATCGATTATGACGATCAATTTCCAAGTGAGGAAGATGAAGAGGTTCCTAACGATGGTGGGGACAGTCTGGTACCATATGCTTCAGATGAACACGAATTAAGTTTGTTCCATGACAGTGAAGAAGCGGAGGAGGAGGAGCAAACGATTCGTGCTGACCTTGGAGGAGGTTGGGGCCGGATTATATACAGTCCCATCCGAAGAGGGAAGCAAGTACAGATGGATGTATGTCGGTCCACCAAACGGGACGCATCTGAAGGCGCGTTTGAGCGTGTAGTTGTCACCCGGAGCAAGAACCCTACCTTGCATTTTCAGGCCCGCAGGTCACTTTGGGGCGACCTCTGGCCATTTTAA |
| Protein: MAAALVPETAQRLLTPETLRTAAKQSQGIHLVPLSLRRAIKRYLRDQDKAHMNRKVLLLSASFDRAKGTGAELAAAATRGALLDDPNAPSGAEQRAARWKVRSAYGDIGLRYREDETVAYVASRMPAIYAACHRVLREVRRRLPEFAPAKVLDFGAGPSSALWAMRAVWPKSIERVNLVEPSKEMQRAGQSLLDNLKGLPLIHSYDSIQELNRNIEKHERGHDLVISSYALGEIPSLSDRITIVRQLWDLTSDVLVLLEPGTPQGAKIISQMRSYILWMEKRKCRKSEKSSSRPPSNVKSIVAHEASLKNGSFVVAPCPHDGQCPLENSDKYCHFVQRLERTSSQRAYKRSKGVPLRGFEDEKFCYVALRRGKRPEEAWPLDGMKFETLKERHAKRKPEDLSIDYDDQFPSEEDEEVPNDGGDSLVPYASDEHELSLFHDSEEAEEEEQTIRADLGGGWGRIIYSPIRRGKQVQMDVCRSTKRDASEGAFERVVVTRSKNPTLHFQARRSLWGDLWPF |